Browse of TCMCG007C07656 protein

CDS

Accession Number	TCMCG007C07656
gbkey	CDS
Protein Id	XP_009101681.1
Location	complement(join(13226736..13226822,13226909..13227010,13227091..13227213,13227290..13227421,13227502..13227602,13227673..13227742,13227825..13227941,13228028..13228171,13228265..13228333,13228433..13228510,13228593..13228772,13228890..13228922))
Gene	LOC103827874
GeneID	103827874
Organism	Brassica rapa

Protein

Length	411aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009103433.3
Definition	small RNA degrading nuclease 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	L
Description	small RNA degrading nuclease
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14570        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03008        [VIEW IN KEGG] map03008        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0016592        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATCATAATCTAGCCACCGCCGAGAAGAATGTGTTGGAAGAATTGGTGAAGCTAGTGCAGCTTCGAGGTCTACGAGGAGAACACGGAGGATGGATTGATTTTTTAGCTGTTTGCAACCAAAAAGCTTCAACACCATCTAACCTTTCCATGGTTTCCCGTGACTTGTTGGTCGCTTTTCTCACAACCTTCAAGAAGAAAGAAGATTTGAAGGCCCTGCAATGTCGTGCTAATAGTCTTCTAGTTGAAAAGTTGAAGCAGGAGACTCCTGAAAATTACACTCCTGAGAAGATGCTTATTCGATTGACCATGAAGCATCCAGAATTCTCGTCAGACTATTCTTTCCCCTCACTCTCCAATGACTGGTTTGTATCCGATATTGGAATGAAGTCGTCGACTGTGATGAAATCAACTGACATGATAGCTGTTGATTGTGAGATGGTTCTTTGTGATGATGGGACTGAGGGTTTGGTCAGAGTCGGCGCTGTCGACCGTCATTTAAAGGTGATTCTTGACAAATATGTGAAACCGGGCAAACCTATTGTTGACTATAGGACAGCCATTACCGGAGTAACTTCACTAGACATCGAAAATGCTACTCTATCTGTGGCAGATATTCAGAGAGAACTTCAGCAATATCTTTCTGATGGTTCTATTTTGGTTGGTCACAGTCTGAATAAAGACATGAGAGTGTTGAAGATAGATCATCCTAAAGTAATTGATACAGCACTTGTGTTCAAATTTTCAAATGCAAGAAATTCAAGAAAACCTTCACTTAATGACCTTCACAAGGCGATTTGTGGTAAGGAAGTCCGAAAGGAAGGTGTTTCTCATGATTGTGTACACGACGCTGCAGCTTCAATGAATATTGCACTTGCTTTTATAAAGAAACCATTTGACACAACAGTTACCCCATCAAAGGAGATGCTGGAGGCCGAGAAATCAAGACTCTTTATTCATAGAATCCCTTCCTATGTGCCATCTGAAAAACTGAACATTGTTCTCGCTGGAGAATTTCATTCCACAAAGTTTAAACTTGATGTTAAGCCAGGAAAAACACAAGGAGGTAACTACTGTGCAGTTGTTGTTTTCGATAGTACCAAAGAAGCTGATCAAGCTTTCGAAAACGTTAATGGATACAAAGAGAGGGATTCATTTGGTCTGCCACAAAAACTGTCCACCTTAAAGCTGAGTTCGGGATTAAGTGCAAGTTGTTATGTCCGCAAAATGGTGTAA

Protein:   MDHNLATAEKNVLEELVKLVQLRGLRGEHGGWIDFLAVCNQKASTPSNLSMVSRDLLVAFLTTFKKKEDLKALQCRANSLLVEKLKQETPENYTPEKMLIRLTMKHPEFSSDYSFPSLSNDWFVSDIGMKSSTVMKSTDMIAVDCEMVLCDDGTEGLVRVGAVDRHLKVILDKYVKPGKPIVDYRTAITGVTSLDIENATLSVADIQRELQQYLSDGSILVGHSLNKDMRVLKIDHPKVIDTALVFKFSNARNSRKPSLNDLHKAICGKEVRKEGVSHDCVHDAAASMNIALAFIKKPFDTTVTPSKEMLEAEKSRLFIHRIPSYVPSEKLNIVLAGEFHSTKFKLDVKPGKTQGGNYCAVVVFDSTKEADQAFENVNGYKERDSFGLPQKLSTLKLSSGLSASCYVRKMV